PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU01571.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 380aa MW: 42517.6 Da PI: 5.4906

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU01571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.6	2.3e-08	221	268	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHU01571.1 221 AHSLAERVRREKIGERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 268 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MDKKSLFMNN VNTMNELNCS TSFYQNDPFE SNIIVSSNTN NFSDNFVLSE VIGKLGSICN 60 SGEISPNSFV DSNNNSCYTT PMSSPPRLNL ANFPSYFASN NLESCKLSRI SRNMCIKENE 120 FGDSRENSSV CEQIPIEEIG IKCQNDANSM KGKSIPKRKA KEIIAKNENV STQNNESSSK 180 RIKCDEKIGS DKEQNEENQK PQEPSKDYIH VRARRGQATD AHSLAERVRR EKIGERMKFL 240 QDLVPGCNKV TGKAVMLDEI INYVQSLQCQ VEFLSMKLSN MNPTMDFNAE SVTSKNMFQS 300 VGSLHHNMNS SLTSVQEFPY GFQSQLGPNI QNLDGLVEQT PQVPTIFEDD LHSFIHMGFG 360 QIQAQNCSGN VSTAQMKAEL

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MDKKSLFMNN VNTMNELNCS TSFYQNDPFE SNIIVSSNTN NFSDNFVLSE VIGKLGSICN  60
SGEISPNSFV DSNNNSCYTT PMSSPPRLNL ANFPSYFASN NLESCKLSRI SRNMCIKENE  120
FGDSRENSSV CEQIPIEEIG IKCQNDANSM KGKSIPKRKA KEIIAKNENV STQNNESSSK  180
RIKCDEKIGS DKEQNEENQK PQEPSKDYIH VRARRGQATD AHSLAERVRR EKIGERMKFL  240
QDLVPGCNKV TGKAVMLDEI INYVQSLQCQ VEFLSMKLSN MNPTMDFNAE SVTSKNMFQS  300
VGSLHHNMNS SLTSVQEFPY GFQSQLGPNI QNLDGLVEQT PQVPTIFEDD LHSFIHMGFG  360
QIQAQNCSGN VSTAQMKAEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	162	PKRKAKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	2e-67	bHLH family protein