PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01208.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 271aa    MW: 30558.9 Da    PI: 9.6557
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08186226954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PHU01208.1 186 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYMKFL 226
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDNIDLLKLS SPCEDQMEMM LLMQMENEMP MLDYSPQRNI INNSNNNNNN NNNIDRNNFS  60
EIFDHHNPPS TLFLNNMSST ISLNGCKSPQ IVHQDSSITL PFLDNSSSTN GKLRSSIRAA  120
NKEQVSSASH LTFPSSHTVK RNSMAAMREM IFRIAAMQPI QIDPASVKAP KRRNVKISSD  180
PQSVAARHRR ERISEKIRIL QRLVPGGTKM DTASMLDEAI HYMKFLKKQV QSLEKVEVNR  240
PIVAPTSGCL GFPVPMSLSG NYYPYHQSVQ P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.11e-44bHLH family protein