PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU01118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 228aa MW: 24913.8 Da PI: 8.7324 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00015 | 95 | 117 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ CgksF + L H +H PHU01118.1 95 YKCSVCGKSFGSYQALGGHKASH 117 9*********9999998888777 PP | |||||||
2 | zf-C2H2 | 14.3 | 0.00012 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k+F++ L H r+H PHU01118.1 147 HECTICHKTFPTGQALGGHKRRH 169 78*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MALEALNSPS TTTPPSLFQF QHTTTQSYIE SWTKGGKRSK RSRSIMEEQR DQPIITEEEY 60 LAFCLLMLAR SGNNNNNNIT TSSATITTNS TKNLYKCSVC GKSFGSYQAL GGHKASHSKL 120 VLINGDNVSS ITTISATSAN SVSGRTHECT ICHKTFPTGQ ALGGHKRRHY EGKMTSSMDV 180 VGSANNFDLN IPALPESWPG FGSSEDEVES PHPAKKSRQF PSTRLELF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 6e-50 | C2H2 family protein |