PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU00810.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 589aa MW: 65246.7 Da PI: 7.5356

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU00810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.5e-11	432	478	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I ++q PHU00810.1 432 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAHITDMQ 478 799*********************66......*************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MTVLWSDEDK TMVAAVLGAK AFDYLMSSLV SAECSLISMG SNENLQNILS DLVERPNGSN 60 FSWNYAIFWQ ISRSKLGELV LGWGDGCCRE AREGEESEVT GILNLHLEDE AQQRMRKRVL 120 QKLHTFFGGT DEENYLFGLD RVTDTEMFFL ASMYFSFPHG QGGPGKCFGA GKHVWLSDVM 180 KSSVDYCSRS FLMKSAGMQT IVLIPTDVGV VELGSVRAIS ESLELVKSIK SCFSSFSSLG 240 RAKQAASVTV VAEKKDGNNS MFSSSFLRDQ SNGNPKIFGQ NLNSGCAQFR EKLVARKPVD 300 RPLETYRNGN KGPFMNAQNG VCPVSWASFG NVKPVNSAEL YSPQAPTNNL RNFAVNGARE 360 EFRLNNLQHQ KPGGMQIDFT NSRPVVYPVH TVESEHSDVE VSCKENHAGP ADETRPRKRG 420 RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA IAHITDMQKK 480 IRDMESERGR LGSPNSETQT RVADINIEAA GDEVIVRVKC PLEIHPLSKV IQVFKEAQAN 540 VVESKVAAGN DTVYHTFVVK SSGSEQLTKE KLMAAFCGES NSLQPHSHQ

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MTVLWSDEDK TMVAAVLGAK AFDYLMSSLV SAECSLISMG SNENLQNILS DLVERPNGSN  60
FSWNYAIFWQ ISRSKLGELV LGWGDGCCRE AREGEESEVT GILNLHLEDE AQQRMRKRVL  120
QKLHTFFGGT DEENYLFGLD RVTDTEMFFL ASMYFSFPHG QGGPGKCFGA GKHVWLSDVM  180
KSSVDYCSRS FLMKSAGMQT IVLIPTDVGV VELGSVRAIS ESLELVKSIK SCFSSFSSLG  240
RAKQAASVTV VAEKKDGNNS MFSSSFLRDQ SNGNPKIFGQ NLNSGCAQFR EKLVARKPVD  300
RPLETYRNGN KGPFMNAQNG VCPVSWASFG NVKPVNSAEL YSPQAPTNNL RNFAVNGARE  360
EFRLNNLQHQ KPGGMQIDFT NSRPVVYPVH TVESEHSDVE VSCKENHAGP ADETRPRKRG  420
RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA IAHITDMQKK  480
IRDMESERGR LGSPNSETQT RVADINIEAA GDEVIVRVKC PLEIHPLSKV IQVFKEAQAN  540
VVESKVAAGN DTVYHTFVVK SSGSEQLTKE KLMAAFCGES NSLQPHSHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein