PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00509.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 216aa    MW: 24475 Da    PI: 5.3516
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.15.7e-081131712290
        FAR1  22 skrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +k+ g+i+  tf C k+ k++ ++k+          +r++Cka+++ + ++d+     ++ leHnH++ 
  PHU00509.1 113 KKDGGQIKYVTFGCGKSRKPKARNKN----------KRVDCKARVNCHVMNDDSCAARSVILEHNHKMD 171
                 45677788888888887777776665..........9*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MVHNDKNSQL RATLNDILGL EKSDSLLHDK NSYDGYDDSP NRYLDSDDED LQNLIDEEMN  60
RSHQSDQDKY LSISDGEEYD HQEDGVDEEE GTIHDDSYTD NQYTAGPIVE KCKKDGGQIK  120
YVTFGCGKSR KPKARNKNKR VDCKARVNCH VMNDDSCAAR SVILEHNHKM DPALSHFLPC  180
HMKLSRTLKR SLVAHDIAGR PSKSIRLLEV EVGGPE