PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU00262.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 242aa MW: 26846.5 Da PI: 6.0343 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 152.6 | 7.4e-48 | 46 | 146 | 2 | 102 |
NF-YC 2 lksfwekqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100 l+++ ++ie+atdfknh+l l+rikki+kadedv+misae+Pvl++kace+fi eltl swlh++enk rtl+k+dia a++rtd+fdflvdi+prde PHU00262.1 46 LRNYERQEIEQATDFKNHQLSLTRIKKIMKADEDVRMISAETPVLFAKACEIFIQELTLSSWLHTKENKHRTLQKNDIAVAISRTDTFDFLVDIIPRDE 144 78999999******************************************************************************************8 PP NF-YC 101 lk 102 +k PHU00262.1 145 VK 146 75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MDNNNTHQSL AETSTTAATA AAAAQSAAYP PQRPYDHVLQ QQLQMLRNYE RQEIEQATDF 60 KNHQLSLTRI KKIMKADEDV RMISAETPVL FAKACEIFIQ ELTLSSWLHT KENKHRTLQK 120 NDIAVAISRT DTFDFLVDII PRDEVKDEGV GLGLAPGGVP YYYSPLDQPA PGGVVLGRPA 180 IPGTVPGVVS DVDPSMYVPY MSLQVCIEAE SRSKIRAKGL VDGQRMNIPT PFLGPEERRR 240 LA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 1e-61 | NF-YC family protein |