PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU00254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 198aa MW: 21802.8 Da PI: 6.5203 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 34.1 | 5.9e-11 | 43 | 81 | 1 | 36 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedv 36 qlk+ w+++ ie++td+knh++ l+rik+i+kad+dv PHU00254.1 43 QLKMLWNYErqeIEQDTDLKNHQISLTRIKNIMKADKDV 81 7999999877779*************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MDNNNNTHQS LAEASTTAAT VAAAAQSGAY PPQRPYDHVL QQQLKMLWNY ERQEIEQDTD 60 LKNHQISLTR IKNIMKADKD VPISRTDTFN FLVDIIPRDE VNNEGVGLGL APGGVPYYYP 120 LLGQLASGGV ILGRPAVPGT VPGVVPDVDP SMYVPHMSLQ VCIEAESRTK IREKGLFDGQ 180 RVNIPTPFLG PKERKRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 1e-15 | NF-YC family protein |