PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT99946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 194aa MW: 22471.4 Da PI: 8.1909 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 58.2 | 2.7e-18 | 12 | 97 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA GF vrk ++k+ rn+ei++ f Cs+eg+ ++ + ++++r+r e r gC a++k k + ++ wev +++ H+H++ PHT99946.1 12 AYNSYAVAKGFGVRKGPKTKN-RNNEIIRCLFLCSCEGQFDKLSPF-QERKRQRLEYRFGCLARIKFKIS-NDMWEVCEFNDVHSHPMI 97 5****************9999.5556*************9999888.89999****************99.9**************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 194 aa Download sequence |
MKFDSEEKSY NAYNSYAVAK GFGVRKGPKT KNRNNEIIRC LFLCSCEGQF DKLSPFQERK 60 RQRLEYRFGC LARIKFKISN DMWEVCEFND VHSHPMIEDN LRHFIQSDRK LTSATKNILD 120 SMVEAENGRK NTYNNFIDQA PAIATAVREV FPENAIGYVN GTSTEMLKRI YPIFIENKDF 180 ETTSILSYGD ASQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-11 | FAR1 family protein |