PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT99830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HB-other | ||||||||
Protein Properties | Length: 146aa MW: 17233 Da PI: 4.1687 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.8 | 1e-09 | 1 | 36 | 18 | 53 |
HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +F k + p + +e+L+ +l+L+ +q+k+WF +R+ PHT99830.1 1 MFSKMPDPEDHVIEKLSGELKLDPTQIKIWFDHKRY 36 6999*******************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MFSKMPDPED HVIEKLSGEL KLDPTQIKIW FDHKRYHIQA QRDMDENEIL RLENERLHAE 60 SLQLYSELNK RICANCNNAE QEQKILQDLQ NENTRLTEEI TRMSNMVAHF EEDPDDSDND 120 PNGTDLELRL ECNDDPNGPD LELRLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21750.2 | 2e-13 | HD-ZIP family protein |