PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99829.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HB-other
Protein Properties Length: 142aa    MW: 16869.7 Da    PI: 4.1202
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.71.1e-094312552
                --HHHHHHHHHHCTS-HHHHHHHHHHHH CS
    Homeobox 25 psaeereeLAkklgLterqVkvWFqNrR 52
                p  + +e+L+++l+L+ +q+k+WF N+R
  PHT99829.1  4 PEDHVIEQLSDELELDPTQIKIWFDNKR 31
                88899**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MSVPEDHVIE QLSDELELDP TQIKIWFDNK RCDIQVQRDM EERGILRLEN ERLHAENLQM  60
YSELNKRICA NCNNAEQKRK ILQELQNEKD RLTEEITRMS NMVAHFEEDP DDYDNDPNGI  120
DLELRLEYND DPNGPDLELR LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.23e-17HD-ZIP family protein