PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT99768.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 117aa MW: 13547 Da PI: 10.8254 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.8e-17 | 1 | 49 | 5 | 56 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 GVr ++ + +++AeIrd + ng r++lg+f+taeeAa +++a+ +++g+ PHT99768.1 1 GVRKRP-WEKYAAEIRDSTRNG--IRVWLGTFDTAEEAALTYDQAAFCMRGP 49 9*****.**********44465..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
GVRKRPWEKY AAEIRDSTRN GIRVWLGTFD TAEEAALTYD QAAFCMRGPS ICLNFPVEKV 60 RESLTKMECS YLLQHGLMSP AAALKEKHKK RRSTSRKNKK KKKNITLLKK KDKKKMC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 103 | KKRRSTSRKNKKKKK |
2 | 89 | 115 | KKRRSTSRKNKKKKKNITLLKKKDKKK |
3 | 99 | 111 | KKKKKNITLLKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 1e-35 | ERF family protein |