PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT99710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 596aa MW: 64954.4 Da PI: 4.682 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 448.5 | 4.4e-137 | 212 | 582 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv++L++cAeav++++++la+al+ ++ la ++ +m+++a+yf+eALa+r+++ ++p+++ e++ ++l++ f+e++P+lkf+h+taN PHT99710.1 212 LVHTLMACAEAVQQENFNLADALVRHIGILAVSQSGAMRKVATYFAEALARRIYK--------IHPQDSIESSYNDVLQM--HFYETCPYLKFAHFTAN 300 689****************************************************........66777765555666554..5**************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 qaIlea+ ++++vH++Df+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++A+++gv+fef+ +va++l+dl+ ++L+++p PHT99710.1 301 QAILEAFTNCNKVHVVDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDTLQQVGWKLAQLADTIGVEFEFRGFVANSLADLDASMLDIRP 399 *************************************************************************************************** PP GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak........lpreseerikvEr 287 Ea+aVn+v++lhrll++++++e vL+ +++++Pk+v++veqea+hn++ F +rf eal+yys++fdsle++ ++ s+++ +++ PHT99710.1 400 seTEAVAVNSVFELHRLLARQGAIER----VLDSIRQMNPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSssshngitQSPVSNQDLLMSE 494 999***************99999999....*********************************************99855555544344459******* PP GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +lgr+i+nvva eg++r+erhe+l++Wr+rl++aGF pv+l+++a kqa++ll+ ++ +dgyrv+e++g+l+lgW++rpL+++SaW+ PHT99710.1 495 IYLGRQICNVVAYEGSDRVERHESLGQWRARLSSAGFDPVHLGSNAFKQASMLLALFAgGDGYRVDENDGCLMLGWHTRPLIATSAWE 582 ***************************************************************************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 596 aa Download sequence |
MKRDRDREKG SSSKGKNWAS VEEEEQPDAG MDELLAVLGY KVKSSDMAEV AQKLEQLEMA 60 MGTSMEDGIS HLSTDTVHKN PSDLSGWVQS MLSELNSTSI SSNFGMSSSE NQLIVSGDGG 120 GGSCSSIIDF SRGNEEKKTA TAISDDDLRA IPGGAVFSSG RNRNEVDEES NKRQRSSFCS 180 SGGSNSSSGG NSLTDSARPV VLVDSQETGV RLVHTLMACA EAVQQENFNL ADALVRHIGI 240 LAVSQSGAMR KVATYFAEAL ARRIYKIHPQ DSIESSYNDV LQMHFYETCP YLKFAHFTAN 300 QAILEAFTNC NKVHVVDFSL KQGMQWPALM QALALRPGGP PAFRLTGIGP PQPDNTDTLQ 360 QVGWKLAQLA DTIGVEFEFR GFVANSLADL DASMLDIRPS ETEAVAVNSV FELHRLLARQ 420 GAIERVLDSI RQMNPKIVTL VEQEANHNAG VFIDRFNEAL HYYSTMFDSL ESSSSSHNGI 480 TQSPVSNQDL LMSEIYLGRQ ICNVVAYEGS DRVERHESLG QWRARLSSAG FDPVHLGSNA 540 FKQASMLLAL FAGGDGYRVD ENDGCLMLGW HTRPLIATSA WEIAAEDDGA GEVELH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 0.0 | GRAS family protein |