PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99350.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 237aa    MW: 26603.9 Da    PI: 4.8761
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.000178100123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C++ Fs+   L  H++ H
  PHT99350.1  78 YRCSFCKRGFSNAQALGGHMNIH 100
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MRKVEIEMVC TCDERGLDAL VKGCERLDIV SMEMGKGRPK KYQGVLFDAM ENDPNSSNSE  60
KYQITWNANE GISQVKCYRC SFCKRGFSNA QALGGHMNIH RKDRAKLREI SIETSDIKKS  120
ISPSPDIPAP SSTDELLQQE VSSDETSSPS KRPCITLEEQ HQHHHPNPIS QEKDENHELI  180
IGGDLLQLPL FVDTPSKEVI NLIETQEGNK DMQLSVDSKL DLELRLGPEP SESSEKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.15e-17C2H2 family protein