PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99278.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 299aa    MW: 32911.4 Da    PI: 8.6979
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00018107129123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C++ Fs++  L  H++ H
  PHT99278.1 107 FSCNFCKREFSTSQALGGHQNAH 129
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MKKPCSSEAS SISAASEESH EVVTNTKKMK EKVVEGPLLN KPSCVDLLVD LKVHNGFNNN  60
NNKTNSMISC LNLEPNLFNS TSTNTHASES SNEATPKQKR TSDGRTFSCN FCKREFSTSQ  120
ALGGHQNAHK QERALAKRRN GLVDVVSPFS PPNYHPYYNP YSNFNSHIPF HGSFSSRPSL  180
GGTVQGGNSF SAILKPTTSY QTWPFLSSYN FRFNPDKWSI SSSSSSLFRS ENPQENYNIG  240
KIGIGGASLA NSISFENKKS GNNLTLMNSP INVDDDNNLG GNNHMKKEEE EGLDLNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.13e-16C2H2 family protein