PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT99261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 379aa MW: 42953.2 Da PI: 8.3988 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.8 | 9.2e-06 | 48 | 70 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C++ F r nL+ H r+H PHT99261.1 48 YICEICNQGFQRDQNLQMHRRRH 70 89********************9 PP | |||||||
2 | zf-C2H2 | 17.4 | 1.2e-05 | 126 | 147 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk + +s++k H++t+ PHT99261.1 126 ICEKCGKGYAVQSDYKAHLKTC 147 7*******************98 PP | |||||||
3 | zf-C2H2 | 11.2 | 0.0011 | 155 | 173 | 5 | 23 |
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ PHT99261.1 155 DCGRVFSRVESFIEHQDTC 173 9***************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence |
MLDNSSSEPL NNSAENSNRR KRRPAGTPDP DAEVVSLSPK TLLESDRYIC EICNQGFQRD 60 QNLQMHRRRH KVPWKLVKNE NPQVKKRVFV CPEPSCLHHD PCHALGDLVG IKKHFRRKHS 120 NNKQWICEKC GKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DTCTVRRSIR 180 PDLQTLQPTT ACSSRTASST SPSSDTNLQK ITTMPLQHNL ELGLLPSITT TSHDQHHENH 240 HQEPHLKLSI GVSSSSQCIV PKNGQEENEV VLNLAMAERA YAEEARRHAK REMEYAEMEF 300 ANAKRIRQQA QGEIERARKL KEEAIKKISS SILEITCHAC KNKFQQNAPI ENNNNNNNIE 360 SSPAMSYMSS ATTDIEGEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68130.1 | 1e-129 | C2H2 family protein |