PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT99161.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 202aa MW: 22855.6 Da PI: 6.7891 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.1 | 6.1e-18 | 151 | 202 | 2 | 53 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 rk+ ++tkeq +Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa PHT99161.1 151 RKKLRLTKEQSAILEDSFKEHHTLNPKQKLALAKRLELRPRQVEVWFQNRRA 202 678899*********************************************8 PP | |||||||
2 | HD-ZIP_I/II | 77.8 | 1.8e-25 | 151 | 202 | 1 | 52 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRA 52 +kk+rl+keq+++LE+sF+e+++L+p++K +la++L+l+prqv+vWFqnrRA PHT99161.1 151 RKKLRLTKEQSAILEDSFKEHHTLNPKQKLALAKRLELRPRQVEVWFQNRRA 202 69*************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MMMEKEDLGL SLSLSFPTEK RTTVINPMQQ RNLIPSTIIS PYATTSTFNL IHKSAPNWST 60 QPLFPDSSSD RNSETCRLVE TRSFLKGIDV NRMPAANGDA EEEAGVSSPN STISSLSGNK 120 RSEREANCEE NEMERASSRG ISDEEDGENC RKKLRLTKEQ SAILEDSFKE HHTLNPKQKL 180 ALAKRLELRP RQVEVWFQNR RA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17460.1 | 3e-48 | HD-ZIP family protein |