PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99008.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 143aa    MW: 15697.5 Da    PI: 10.5848
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA658.2e-212154134
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                Cs C+ttkTplWR+gp+g+k+LCnaCG++yrkk+
  PHT99008.1 21 CSDCKTTKTPLWRSGPSGPKSLCNACGIKYRKKK 54
                ********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MDPIKKEECS GDETSGSTKS CSDCKTTKTP LWRSGPSGPK SLCNACGIKY RKKKGPTKKK  60
EKPVSNTSSD DLAYCKKDKI GNGKDGKQLS KVLRVKLMML GKEVVILQRQ RSSMKKPRNQ  120
RKLGEVERAA LLLMALSCGS VFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15179RKKKGPTKKKEKPVSNTSSDDLAYCKKDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-17GATA family protein