PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98870.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 183aa    MW: 20934.1 Da    PI: 10.3183
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3421.6e-1337122796
                 .-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   7 psdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 ++++l+   l+lp  fa+++  ++   +++l+l de+ r W+v l   + +++ + +++GW +F  ang+++gD+  F+l++ +++ + v++
  PHT98870.1  37 QPYTLRFPVLYLPMAFAKSNgFLN---KRELILVDEKQRLWSVCL--GRIGNThFGIKRGWPQFRLANGVQVGDTYKFELTN-NDTVPIVHF 122
                 6666666779**********5444...347***************..555555499***********************987.555567765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MYTTVVRLKT SDVTTPESQI AASTSGDANP HFISTVQPYT LRFPVLYLPM AFAKSNGFLN  60
KRELILVDEK QRLWSVCLGR IGNTHFGIKR GWPQFRLANG VQVGDTYKFE LTNNDTVPIV  120
HFHSFVGLLR FDAQHQPALN ISIGFLKYLK RHEYIEHAIL KKAGKKWQMK VNDRRFEAGA  180
EPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.19e-17B3 family protein