PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98861.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 656aa MW: 73392.9 Da PI: 5.6231

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	420	457	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV +WF N R + PHT98861.1 420 FEHflHPYPKDSEKIMLARQTGLTRSQVANWFINARVR 457 554459******************************88 PP
2	BELL	119.7	1.4e-38	286	357	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er++l++k +kL s+l+eVd+rYk y++q+q+v+ssFe+vaglg+akpYtslAlk+iSr+FrcL+dai++qi PHT98861.1 286 ERHDLESKMTKLFSVLDEVDRRYKEYYQQMQVVVSSFEMVAGLGAAKPYTSLALKTISRQFRCLRDAIKKQI 357 799********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MSAYYSNLSN QREVLPMSFL PDQKFVSYQS TDHSDSPVHL NQHSASVSYS ELPTQNYGEV 60 QTMRGKDEML FIPPTSESGG MQPIGRAVNA VPNFLENSVM MDPHSFPIKQ LLVPNSEQSL 120 QNQGLSLSLG TQVPLSLHVY SYQDDYTNSG LSSLVGTHVL HSEQGSENKE SKVAEYLSFD 180 LAGGTRAANN PQSSMSLREL NSGVRPHVVS GAAAAIYNSK YLKAAQDLLD EVVNVQEALK 240 ESDKLRNFNL LGQDRSEEAD LKSSSSATGI SGDHNNSTKA EISPSERHDL ESKMTKLFSV 300 LDEVDRRYKE YYQQMQVVVS SFEMVAGLGA AKPYTSLALK TISRQFRCLR DAIKKQIQIT 360 RRSLGEQGDS QGERLYRLRY VDQQLRQQRS LQQFGMMRQP WRPQRGLPET AVSVLRAWLF 420 EHFLHPYPKD SEKIMLARQT GLTRSQVANW FINARVRLWK PMIEDMYKEE FGVAEAGSGA 480 SPERRLLVDS KEKSIAENTG EEIPESFTTP AANCSHLDPS DESSNVVTNV QNNPFATKFS 540 FQDGAFEHER IDCGSSKLQS EQIPITHGFG LKPSSDGNII GALNTYHPSM LGDIMGNQVS 600 LALRLQNSQM DQQPQLREDE KTDSTVDIGK GEYYYIDPVN QQERFSGPHL LSDFVV

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MSAYYSNLSN QREVLPMSFL PDQKFVSYQS TDHSDSPVHL NQHSASVSYS ELPTQNYGEV  60
QTMRGKDEML FIPPTSESGG MQPIGRAVNA VPNFLENSVM MDPHSFPIKQ LLVPNSEQSL  120
QNQGLSLSLG TQVPLSLHVY SYQDDYTNSG LSSLVGTHVL HSEQGSENKE SKVAEYLSFD  180
LAGGTRAANN PQSSMSLREL NSGVRPHVVS GAAAAIYNSK YLKAAQDLLD EVVNVQEALK  240
ESDKLRNFNL LGQDRSEEAD LKSSSSATGI SGDHNNSTKA EISPSERHDL ESKMTKLFSV  300
LDEVDRRYKE YYQQMQVVVS SFEMVAGLGA AKPYTSLALK TISRQFRCLR DAIKKQIQIT  360
RRSLGEQGDS QGERLYRLRY VDQQLRQQRS LQQFGMMRQP WRPQRGLPET AVSVLRAWLF  420
EHFLHPYPKD SEKIMLARQT GLTRSQVANW FINARVRLWK PMIEDMYKEE FGVAEAGSGA  480
SPERRLLVDS KEKSIAENTG EEIPESFTTP AANCSHLDPS DESSNVVTNV QNNPFATKFS  540
FQDGAFEHER IDCGSSKLQS EQIPITHGFG LKPSSDGNII GALNTYHPSM LGDIMGNQVS  600
LALRLQNSQM DQQPQLREDE KTDSTVDIGK GEYYYIDPVN QQERFSGPHL LSDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-103	TALE family protein