PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98529.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 231aa    MW: 26017.6 Da    PI: 9.4958
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019107129123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C k F+++  L  H++ H
  PHT98529.1 107 YECHFCLKKFTNSRALGGHQNAH 129
                 99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MDKALYRKPT NLNLPLTGRN GADIVCCKTT TSDKKLRIFG FEVNPCPKDI ICSTSESKES  60
IISSETFADE RPVGKTSICM NSSGIVHPNP NENLRNLSSS VVSEVKYECH FCLKKFTNSR  120
ALGGHQNAHR KERLKKKRMD LEAKRASSMF HLYSLIRNSG VIYPYYSLSH RNPALFVPTI  180
VSGSSLVNFD SVYHYHNVTH PLYVTVDADQ GELRLQNNWQ GGAYRGRDLL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.13e-11C2H2 family protein