PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98487.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 277aa    MW: 29923.1 Da    PI: 5.2312
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.3e-11160207455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PHT98487.1 160 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 207
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDPPIINESS FSAANPSSYS LAEIWPFSSA AANGDIGGGG LGLRMSSFTG LLEAAANSIN  60
ESTVTEQSGR SGGDGGVRKR DVNSEDDFSK FVSTSDANEL DGSVAKRLKA SQSKEENGAS  120
KVELESSSQT ANKGTEQSSK PEPPKDYIHV RARRGQATDS HSLAERARRE KISERMKILQ  180
DLVPGCNKVI GKALVLDEII NYIQSLQRQV EFLSMKLEAV NSRMNHPIET FPSKDLAPST  240
FDATGMIFGT QAPREYAQGA QSEWLHMQVG SSFDRAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.16e-77bHLH family protein