PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT98282.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YA | ||||||||
Protein Properties | Length: 229aa MW: 25337.5 Da PI: 9.9613 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 85.6 | 7.4e-27 | 65 | 119 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p++VNaKQy++Il+RR+ Rak e e+kl k rkp+lh SRh hA+rRpRg gGrF PHT98282.1 65 TPIFVNAKQYHGILRRRKLRAK-EMENKL-LKPRKPFLHLSRHLHAMRRPRGGGGRF 119 7********************9.566999.9*************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MDQPISSDSQ SGDSNSSYKA ENLTNVMSSL SMQSYNVDYQ GHFYQCFGQP LGRIMLPLNL 60 TSDETPIFVN AKQYHGILRR RKLRAKEMEN KLLKPRKPFL HLSRHLHAMR RPRGGGGRFL 120 NTRKANGSIN NDANGTTKTS NMKCHPTGSQ NSDISSFNSP KETTNRMSCN SSEVTSLYSR 180 GSSFGTFPIH NSPSVDAFID MMNTGHDDIL MASKWGSAAA ASSCCNLKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.3 | 4e-31 | NF-YA family protein |