PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT98131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Nin-like | ||||||||
Protein Properties | Length: 204aa MW: 23366.3 Da PI: 7.4235 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 69.7 | 4e-22 | 113 | 162 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l+d + y +lpi+ AAk+L++c+Tv+K+ CR+ G++RWP+Rki+s+ PHT98131.1 113 GKLRLKDFAGYLHLPIEIAAKKLNICPTVMKKVCRRDGLSRWPYRKINSI 162 68999*******************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MDFSSQTHKS SQIFDFSNDS TNSVKQFLVH YFEACKSEGY IVLQDPLCNF YEALGVGSDG 60 GDCFDIDSLL QLSPTTSRDF KMDQQEKRNE SEDNNSDVRH EKISLSAQRE RTGKLRLKDF 120 AGYLHLPIEI AAKKLNICPT VMKKVCRRDG LSRWPYRKIN SIQRKISLRE KCLSSNHVEE 180 RVSAKAAIAK LEQELDNIFE AFSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 1e-11 | Nin-like family protein |