PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT98072.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 170aa MW: 19043 Da PI: 9.916 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 50 | 72 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k+Fs+ L H +H PHT98072.1 50 FKCKTCNKRFSSFQALGGHRASH 72 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 11.8 | 0.00073 | 92 | 112 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 +kC++Cg+ Fs+ L H+r PHT98072.1 92 HKCSICGMEFSSGQALGGHMR 112 79*************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MNKNILNNMS VMKRKREDYG LVEAEAMANC ALMLSSRSSA SFDGDNLNSF KCKTCNKRFS 60 SFQALGGHRA SHNKRPKLLG DFLIQAKKNM LHKCSICGME FSSGQALGGH MRCHREEINK 120 TVIPVLKKSN SSKRIFGLDL NLTPHDDDDD VDLKLWPTAP ISSPVLRIFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 2e-29 | C2H2 family protein |