PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT97737.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GATA | ||||||||
Protein Properties | Length: 214aa MW: 23665.5 Da PI: 5.1472 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 39.4 | 8.3e-13 | 37 | 65 | 7 | 35 |
GATA 7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35 ++T +WR+gp +++LCnaCGl++r + + PHT97737.1 37 IETFNWRNGPHEKPMLCNACGLRWRTRQT 65 57***********************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MIRGHCGRGN LRKGLVVFDE MEKSGCLRNV VTYNTIIETF NWRNGPHEKP MLCNACGLRW 60 RTRQTLDGCV PKHANGEIQS SQLPSEMKPA RDDQKLEVGV EVSGQHGSSA CLEEEMNNIS 120 AIGSAGSASD NCIQMEETNE IGVFGRDKMG DHNMRLHEMR KEIDALKGSM EGVASSVSKM 180 GDIVDTKVTN ANDRDQAIDC YNDNGSWAIT EWTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.2 | 2e-11 | GATA family protein |