PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97655.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Nin-like
Protein Properties Length: 154aa    MW: 16735.2 Da    PI: 10.4384
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK21.54.8e-07921063852
      RWP-RK  38 qyGIkRWPhRkiksl 52 
                 q+GI+RWP+Rki+++
  PHT97655.1  92 QHGISRWPSRKINKV 106
                 89***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MNGAKGAEGV NGTAEGHNYS SFSENKQTGK KSERKRGKTK KTISLEILQQ HFAGSLTDAV  60
KSLGGMLFKI LGTYSSLCVA YNNCPLFPLP VQHGISRWPS RKINKVNRSL SKLKRVIESM  120
QEADGTFSLT SLAPNSLPIT IGSIYWPTGM TDSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.19e-26Nin-like family protein