PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT97307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 92aa MW: 10797.1 Da PI: 9.7957 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33 | 1.4e-10 | 4 | 48 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrw 44 +WTt +++ +a ++ ++ W+ Iar++g g++ ++++ ++ PHT97307.1 4 NWTTKQNKKFEEALVMYDKDnngeKWHNIARHVG-GKSVEEVRRHY 48 8*********************************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence |
MATNWTTKQN KKFEEALVMY DKDNNGEKWH NIARHVGGKS VEEVRRHYDL LLRDITQIEN 60 GQVPLPNYRN ASESNARGYA NEQRLLKNLK LQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 3e-31 | MYB_related family protein |