PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT96968.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 418aa MW: 46993.3 Da PI: 7.7781

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT96968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.4	1.7e-29	200	259	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ ed +++++tYeg+Hnh+ PHT96968.1 200 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpTCPVRKQVQRCCEDMSILITTYEGTHNHS 259 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MQATITTTSM NTNSRNSFVT SIKNQEDQLI NSTKCQIVEA KEENERLKWM LSKTMKDYKS 60 LQMHFQGIIN QNSNNIIAKS PSNIIEKEVE HLSLSLGRSS SCSTSKVFKK ELYDQNDECK 120 SQKNCKLYDG LDLGLDCKFS QDHLTDDHSP ENSFEESNKE NIKMARISRN HDEDEDEDED 180 FWDKKKARVS IRAVCGTTTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVSP TCPVRKQVQR 240 CCEDMSILIT TYEGTHNHSL PFSATAMAST TSAAASMLRC TSSSTSPLPQ QSGLPNVNQN 300 LHGKFNFTNS NSNNLLPTYN NNASTFYLPP KTSISTCQSH PTITLDFTTN TSLSSTHHTL 360 ISSQRYPSNS LKFSTPISPS TSSTYLGRPC FSHQPLMITS KNNQNTIEYN GEVRNSDD

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MQATITTTSM NTNSRNSFVT SIKNQEDQLI NSTKCQIVEA KEENERLKWM LSKTMKDYKS  60
LQMHFQGIIN QNSNNIIAKS PSNIIEKEVE HLSLSLGRSS SCSTSKVFKK ELYDQNDECK  120
SQKNCKLYDG LDLGLDCKFS QDHLTDDHSP ENSFEESNKE NIKMARISRN HDEDEDEDED  180
FWDKKKARVS IRAVCGTTTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVSP TCPVRKQVQR  240
CCEDMSILIT TYEGTHNHSL PFSATAMAST TSAAASMLRC TSSSTSPLPQ QSGLPNVNQN  300
LHGKFNFTNS NSNNLLPTYN NNASTFYLPP KTSISTCQSH PTITLDFTTN TSLSSTHHTL  360
ISSQRYPSNS LKFSTPISPS TSSTYLGRPC FSHQPLMITS KNNQNTIEYN GEVRNSDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	7e-49	WRKY family protein