PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT96786.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 360aa    MW: 41516.8 Da    PI: 6.2725
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT96786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.52.1e-1322107290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  Yn+YA    F vrk  ++++  +ge+++  f Cs+eg++++ +   ++++++r e r+g  a++k k + +g wev +++  H+H++ 
  PHT96786.1  22 AYNSYAVARDFVVRKGGKTNN-VKGETISCLFLCSCEGQSDKLSPF-QERKQQRLEYRCGYMARIKFKIS-NGIWEVCEFNDVHSHPMI 107
                 5***************98877.78889*************999888.999999**************999.***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MKDAHDDKGK DSSAQEEESY NAYNSYAVAR DFVVRKGGKT NNVKGETISC LFLCSCEGQS  60
DKLSPFQERK QQRLEYRCGY MARIKFKISN GIWEVCEFND VHSHPMIEDN LKHFMHSDRR  120
LTNATKNILG SMIDADIHTK KVVQYLQNET VGVENVGFIE LDAHNFVQAH KRNMISSGDA  180
QTLINHFMHL QSEDSNFFYS FQVDEDGRVG LKLCDYSNFR ATFVGIAYGY LQILNRDLKV  240
SSESDTFYAT QVVTNLQRQQ VQSRLIACNY LEANIDLMDI LVAGYENTDM DLHYSTMLRE  300
CIRHQSVARY VLEPVHVKKF FDYIQLPNFD IVADAAATFK ELLTRHKSTV AEFLSKNYDW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-19FAR1 family protein