PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT96501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 200aa MW: 22542.1 Da PI: 5.4649 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.7 | 1.2e-17 | 67 | 116 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 ++GVr+++ +g+W+AeIr p + +r +lg+f tae+Aa+a+++ + +++ge PHT96501.1 67 FRGVRQRP-WGKWAAEIRNP-----HkaQRLWLGTFATAEDAARAYDKKAVEFRGE 116 8*******.**********7.....337************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MDGEAAQLLR EVQNVATSDN SMPRRDIIMD SDSVQPGASS YHIGSSLNVE LQQGKKRRRR 60 RNTKKEFRGV RQRPWGKWAA EIRNPHKAQR LWLGTFATAE DAARAYDKKA VEFRGEKAKT 120 NFPIEEYIDG VVSNDQNKTP MVVVEDEEAV QNVMNGAEVA AVGAVNNTKN AVENGMENDK 180 DDFWENLEED GLVKMITRTC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 55 | 60 | KKRRRR |
2 | 55 | 61 | KKRRRRR |
3 | 56 | 61 | KKRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 5e-27 | ERF family protein |