PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT60213.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 394aa    MW: 43348.4 Da    PI: 5.4726
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT60213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.1e-12325370655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L++l P+     +k  + a++L +Av+YIk+Lq
  PHT60213.1 325 SIAERMRRTRISERMKKLQDLFPNM----DKQTNTADMLDLAVDYIKDLQ 370
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MFSSEPISRE MDKLNSFLFS VGGASSFKNG EGIEADYLRS KEMMGSEYFQ QQQSAYHQQN  60
NSNNCNSSNN NSGGLTSYKS APSSFFAGIL DGEGNDSGEN FVTHDGSSSS DSDSMFTALL  120
NNSDNGATGD LKNQLQFGSC MKQEIAEEFG NENRYENGGV TYGVGVQMQS GGNSNLIRQS  180
SSPAGFFNGF MREVGNFGAS VGTTKEASTS ANAFSNHISY SSAQSSSSNF MPSIAEDESW  240
NDSPFNSLKR NRDGDMKMFS TNNFNGMTNQ SDESRNYNSS GLTHHLSLPK TSSEMAAIEK  300
YLQFQQDSVP CKIRAKRGCA THPRSIAERM RRTRISERMK KLQDLFPNMD KQTNTADMLD  360
LAVDYIKDLQ KQVQTLTDKK AKCSCTSKQL EYST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.18e-64bHLH family protein