PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT60134.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 275aa    MW: 30015 Da    PI: 9.5278
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT60134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025218237323
                 ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                 C+ Cgk+F  ++ L+ H++++
  PHT60134.1 218 CSQCGKPF-KPEKLHAHMKSC 237
                 ********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MQKEQTKQED QNPMDSSKKT PSEIEEESQN IASETSTITT DNSPKFQEEE EEKVNNFDNS  60
FSSNSSSSIS SFGSMKTKKK IDQDHHHVIE HGENNSTDKN SSKNPKFNKS KSYSNGASSI  120
FRNLITCGAV DTNDAGIVPL RKNKTSLSSD KTVSFSSEIC KADKIGGSQR IFGTSWNQQT  180
TNGRKSCDGA FGYSKNKSEF GSRRSVSANY KPINGPNCSQ CGKPFKPEKL HAHMKSCKGM  240
KALAKGAYSA TAAATEKTSK DASKVDSLSA KFLTH