PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59544.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 295aa    MW: 32901.8 Da    PI: 5.7249
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.61.1e-13107154355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h  +Er+RR+r  + f+ L + +P +     kKl+Ka+iLe A++YI +Lq
  PHT59544.1 107 QEHILAERKRRERFSHLFAVLAKTIPGL-----KKLDKASILEDAIKYIGELQ 154
                 78999***********************.....9****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MENASFNNNT DGEEAPFEFK NLLSEMFTSF SNQNPNTFFS SPNSSTSTNS SSSTQNNIIS  60
FGNPDSNYLD PQDNELEYDK MLMMSSNIST SSTTVAKRIC RSPLQSQEHI LAERKRRERF  120
SHLFAVLAKT IPGLKKLDKA SILEDAIKYI GELQERVSTL EEAAGTTKTG NLIESTSTAQ  180
KTHSLAAITS HHDNSFKNVD HESKYHDMKV QILDKNVLIG INCSKQMRSI FSIIAGIMET  240
LHLTIHHIRV APSNHSTALH YISILAEIDD VDITVQDVEK AFELSLLSTP NLTQD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113118ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.17e-25bHLH family protein