PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59284.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 270aa    MW: 29476.5 Da    PI: 10.2692
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59284.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19203253155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++k +grW+AeIrd ++   ++r++lg+f+taeeA  a+++a+ +++g
  PHT59284.1 203 KKYRGVRQRK-WGRWAAEIRDKRN---NTRHWLGSFDTAEEAVVAYDEAAIEING 253
                 59*******9.**********533...4***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MELRLLETKG TGRCLGAVSS GDRAVGIDGA AAGDRAEAVG DRSAAGDRAA AGWRPSCGCW  60
RSSGGYWXXX YWRLRGGCWI SPEPEGGAVG SRQSWRRGCW ISPEPKPERK GGEGIGTRAG  120
EWGSMNGGEG RELEPDISDG GRRGEATGVG AEGRSDEAEI LLGEKSKRPK KLWIKEIMIE  180
SGRTRVISKK KSKEKKLLQV NMKKYRGVRQ RKWGRWAAEI RDKRNNTRHW LGSFDTAEEA  240
VVAYDEAAIE INGANALTNI LAPPSKKINP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.13e-14ERF family protein