PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59190.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 282aa    MW: 32560.9 Da    PI: 8.2866
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.62.1e-2331118290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +YneYA+++GFsvrk++ +k++ +g +t+ +f+C+keg+r+ +k++ +  +++r+etrtgC a++ ++ +++g++++t +e +Hn +l+
  PHT59190.1  31 CYNEYATSIGFSVRKKYANKNRVQGYVTSTKFTCNKEGYRNIDKRD-SIVKKHRKETRTGCLAHIIISHQSNGVFHITLFEDKHNYPLV 118
                 7******************************************999.99999*********************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDPISTKPQG ECNVSIKLGM GFGSDEHAYE CYNEYATSIG FSVRKKYANK NRVQGYVTST  60
KFTCNKEGYR NIDKRDSIVK KHRKETRTGC LAHIIISHQS NGVFHITLFE DKHNYPLVDP  120
TLSYLLPSQR KIKVVQAYEL DLLDDSGIRL KASIEYAARQ AGGQSFLGYT KRDHKNYLRD  180
KRQESLKHGL DDDSLITNVF WVDAKMIRDF KMYEDVVSFD TPYRTNKEYR PLALFVGLNN  240
HSEMIIFGAA VLFEESTESF EWIFNAFFKI MSADKPQTFM TD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-50FAR1 family protein