PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59171.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRF
Protein Properties Length: 415aa    MW: 46050.4 Da    PI: 8.4235
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC72.54.8e-23122165145
         WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                 d+epgrCrRtDGKkWRC+r+v++g+k+CE H+hrg  rsrk++e+
  PHT59171.1 122 DPEPGRCRRTDGKKWRCRRDVIPGQKYCEQHMHRG-RRSRKHVEA 165
                 79*********************************.799999987 PP

2WRC62.18.5e-20309347240
         WRC   2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsr 40 
                 +e+ rCrR+DGKkWRCsr+v++ +k+CE H+hrg +r++
  PHT59171.1 309 TEQERCRRSDGKKWRCSRNVVPHQKYCEIHMHRGAKRKS 347
                 6899******************************99986 PP

3QLQ42.32.3e-155893136
         QLQ  1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                s FT aQ+ +L  Q+ ++KyL++++PvP +L + i+
  PHT59171.1 58 SVFTEAQFRELQLQAVIFKYLVSGLPVPFHLFFTIW 93
                67*****************************99998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MQLHQFSVTT LFPSGKGKED EIKEEQVSPP PCIELSLGNG SSSHVVEEEE VKDGKAKSVF  60
TEAQFRELQL QAVIFKYLVS GLPVPFHLFF TIWSSVSSSL GDGGIYKLYP TLGRFDYTSM  120
MDPEPGRCRR TDGKKWRCRR DVIPGQKYCE QHMHRGRRSR KHVEASEYVK KSDDASVASL  180
RAKLYASSDD LGNKCAPASS KTSCLSSSRN NQNISIEDSS TKPRFINSSN SSDKKDNLMT  240
CNRKDNASCP RTPSFIAGDD ADSKNIDFNR ISPSTTNQKQ NCGDARNDGA LLPIYGVLAK  300
SDLQHTTETE QERCRRSDGK KWRCSRNVVP HQKYCEIHMH RGAKRKSVAP DSVVVPPCKP  360
SFCPPENDAT GRNLNTSLSI YTIPGPQNTT DGDSNSNSTS DATTITDEIP AFVSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45480.18e-34GRF family protein