PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT59117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | YABBY | ||||||||
Protein Properties | Length: 217aa MW: 24086.5 Da PI: 7.6187 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 226.3 | 8e-70 | 23 | 181 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvssekls 102 s eq+CyvqCnfC+t+lavsvP +s fk vtvrCGhCt+llsvn+ + a + hl +s+ + ll+e +++ +l +n+ + + +s ++ PHT59117.1 23 SGEQLCYVQCNFCDTVLAVSVPCSSFFKNVTVRCGHCTNLLSVNIILP--TAANQLHLPHSFFSPqnLLDEIRNNPPTLLMNQPINPN-----ES-LMP 113 579***************************************998755..45566778888765523667776666666555433322.....22.357 PP YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +e+p++p ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl PHT59117.1 114 VRGVDELPKPPVANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 181 788999***999******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MSSSSAAFAP DHHLHHHHLS PPSGEQLCYV QCNFCDTVLA VSVPCSSFFK NVTVRCGHCT 60 NLLSVNIILP TAANQLHLPH SFFSPQNLLD EIRNNPPTLL MNQPINPNES LMPVRGVDEL 120 PKPPVANRPP EKRQRVPSAY NRFIKDEIQR IKAGNPDISH REAFSAAAKN WAHFPHIHFG 180 LMPDQPVKKP NACQQEGEDV LMKEGFLGPA NIGVSPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 6e-87 | YABBY family protein |