PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58791.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 228aa    MW: 26242.3 Da    PI: 7.9522
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1882133155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++ykGVr+++ +g+++AeIrdp     r +r +lg++ t+e+Aa a+++ + +l+g
  PHT58791.1  82 KKYKGVRRRP-WGKYAAEIRDPHR---RgARLWLGTYETPEDAALAYDRTAYRLRG 133
                 59********.**********743...24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MQGLSLDFEQ NYLDNMQYLF NDPDFSQILL EIQSPRQYSS IPDHQNGMFQ QNIHQENQDS  60
VPISQETTKN VTEPILLDDR PKKYKGVRRR PWGKYAAEIR DPHRRGARLW LGTYETPEDA  120
ALAYDRTAYR LRGTSALLNF PHLIESNVTE INRVRPRRRP RTLEICSRCS SPPPSIGDNN  180
QSNNDNTDGP SSKRRNVALI NSLATANNLD CQSIIMERCL TSNNYLFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155161RPRRRPR
2156162PRRRPRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-33ERF family protein