PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58784.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 200aa    MW: 23053.7 Da    PI: 10.5299
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.9e-1986136255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp    +rkr +lg++ t e+Aa a+++a+ k++g
  PHT58784.1  86 RYRGVRRRP-WGKFAAEIRDPDR--RRKRLWLGTYETSEDAALAYDQAAFKMHG 136
                 7********.**********833..46**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MNPFDQNCSF SEISSDFSKS FSPMNSSNAT PNNSPSSSFD SFLWDENINE ETMYLQSHKK  60
PKPGHKDKMQ GPREAREEST RQDWRRYRGV RRRPWGKFAA EIRDPDRRRK RLWLGTYETS  120
EDAALAYDQA AFKMHGSKAR LNFPHLIGPN MPEPPRVTAR RCSRSLEPKP PSSSPSSENG  180
TRKRNIDVIN SIAKAKSFWL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
191111RRRPWGKFAAEIRDPDRRRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-28ERF family protein