PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58663.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 480aa MW: 53609.7 Da PI: 5.7387

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.4	6e-14	303	346	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er+RR+ri+++++ Lr l+P+ + K++K++iL A++YI++Lq PHT58663.1 303 VTERKRRNRIKDGLFALRALVPNiS------KMDKVTILGDAIDYINELQ 346 57*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MERALEWLRP LVDSKNWEYC VVWKLGDDPS RFIEWMGCCC SGANGVDVNV KKENGGKQKV 60 TALCKDIQVQ HPIRTKACEA LAQFPLSISL YSGIQGEVVT SNEPKWINHA EISNSSLSHD 120 LKGTLVLIPV AGGLVELYSS KLIYKDQKTI NFIINRFKLG SEEANSSIAR KEDQVLDFFS 180 YEKLNFTAPL MQYATSFPST APHISQVSES SANPSIQGSS TGSTRSNELT LCHSPCDHLS 240 QNIPLSQSTE GYFEHTELQC SGNLSRMEGS AFPWKQENYI VAGDMFAVGK KRQKGPYQSK 300 NLVTERKRRN RIKDGLFALR ALVPNISKMD KVTILGDAID YINELQEKVK LYETELNEIE 360 AEFTNNEAAE MVLSDMTEIS KVTEPTNEKT QSSNTTNRTR MELEVNQIDA KKFLLKVSGS 420 HKTGRFTQLM EAMSYLGLEI VNVSFTTSGG EILSIFITEA NVDNVVDSQK LRSSLMELTS

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MERALEWLRP LVDSKNWEYC VVWKLGDDPS RFIEWMGCCC SGANGVDVNV KKENGGKQKV  60
TALCKDIQVQ HPIRTKACEA LAQFPLSISL YSGIQGEVVT SNEPKWINHA EISNSSLSHD  120
LKGTLVLIPV AGGLVELYSS KLIYKDQKTI NFIINRFKLG SEEANSSIAR KEDQVLDFFS  180
YEKLNFTAPL MQYATSFPST APHISQVSES SANPSIQGSS TGSTRSNELT LCHSPCDHLS  240
QNIPLSQSTE GYFEHTELQC SGNLSRMEGS AFPWKQENYI VAGDMFAVGK KRQKGPYQSK  300
NLVTERKRRN RIKDGLFALR ALVPNISKMD KVTILGDAID YINELQEKVK LYETELNEIE  360
AEFTNNEAAE MVLSDMTEIS KVTEPTNEKT QSSNTTNRTR MELEVNQIDA KKFLLKVSGS  420
HKTGRFTQLM EAMSYLGLEI VNVSFTTSGG EILSIFITEA NVDNVVDSQK LRSSLMELTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	295	GKKRQKG
2	290	309	KKRQKGPYQSKNLVTERKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10610.1	2e-48	bHLH family protein