PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT58637.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRF | ||||||||
Protein Properties | Length: 440aa MW: 48353.1 Da PI: 9.2734 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.9 | 9.6e-25 | 48 | 92 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ PHT58637.1 48 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 92 79****************************************986 PP | |||||||
2 | QLQ | 28 | 6.8e-11 | 1 | 22 | 16 | 37 |
QLQ 16 lAyKyLaanqPvPpeLlqaiqk 37 ++yKyL+a++PvPp+L+++i++ PHT58637.1 1 MIYKYLVAGLPVPPDLVVPIRR 22 8*******************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence |
MIYKYLVAGL PVPPDLVVPI RRSFEAISAR FFHHPSLGYC SYYGKKFDPE PGRCRRTDGK 60 KWRCSKDAYP DSKYCERHMH RGRNRSRKPV ESQSTSQSLS TSMSQITTGS STTRGSFQTS 120 GSGSFQNMPL YSVANSGALN YGSTATKLQK EPVSCGIDNK DYRYLHGIAP DADEHNLSSE 180 ASATVRSFGM GTNTDGTWVF PSQVSSSPMA RQKNDSQMLG SSTEMHLPNL LEPMIDSTIS 240 KRRHQHCFFG SDIDSPGTVK EEQQHSMRPF FNEWPTAKES WSNLDDEGSN KNNFSTTQLS 300 ISIPIAPSNF SSRSACSPNA LHTQYIFRTD VPHGGPAFHA AGTVMMPVTT SKNTGKQVDV 360 AVGEGTSKSP TITANQSEAP AEHASKTSPS PKEIRGMRTI SPEPPINAVD QDLRNAVQLL 420 TRIVARQAQG KPFLLQVLMV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 6e-38 | GRF family protein |