PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT58456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 151aa MW: 17547.9 Da PI: 4.4734 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.7 | 4.7e-07 | 5 | 44 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W e+de+l+++ k ++ W+ Ia +g Rt qc++r+ k PHT58456.1 5 WEREDDEKLLHLAKIMPQQ-WTIIAPILG--RTSSQCIERYDK 44 999**************99.********8..*********976 PP | |||||||
2 | Myb_DNA-binding | 24.8 | 4.9e-08 | 51 | 92 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W e+de+l+++ k ++ W+ Ia+ +g Rt qc++r+ k+l PHT58456.1 51 WEREDDEKLLHLAKIMPQQ-WTIIASILG--RTSSQCIERYDKLL 92 999**************99.********8..**********8875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MVRGWEREDD EKLLHLAKIM PQQWTIIAPI LGRTSSQCIE RYDKILDGEG WEREDDEKLL 60 HLAKIMPQQW TIIASILGRT SSQCIERYDK LLDGENYDKL LPWEIESHPD QSKPAPPDPI 120 NMDDDEKKML SHAPQIPDYE LEAIEKIGAK N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 4e-33 | MYB family protein |