PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58310.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRF
Protein Properties Length: 310aa    MW: 34278.9 Da    PI: 9.27
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.11.7e-244892145
         WRC  1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
                d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+
  PHT58310.1 48 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKPVES 92
                79****************************************986 PP

2QLQ28.64.5e-111221637
         QLQ 16 lAyKyLaanqPvPpeLlqaiqk 37
                ++yKyL+a++PvPp+L+++i++
  PHT58310.1  1 MIYKYLVAGLPVPPDLVVPIRR 22
                8*******************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MIYKYLVAGL PVPPDLVVPI RRSFDAISAR FFNHPSLGYC SYYGKKFDPE PGRCRRTDGK  60
KWRCSKDAHP DSKYCERHMH RGRNRSRKPV ESQTTSQSLS TSISHITTGS SNRSGSFQSN  120
SSGSFQNMPL YSVANSDGMS YGSTTTKLQM EPVSYGVNNK DYRYLHGMAP DADEESFSSE  180
ASASVRGLGG TGSNTDNMWR LLPSQVPSKP NLKNDSQLLG SSPNPFEPVI ESKQQPQHCF  240
FSSDIGSPGT LKQEPQHPMR SFFDEWPTSK ESWSNLDEGS SKNNFSTTQL SISIPNAPSG  300
FSSRSAPSPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.14e-38GRF family protein