PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58286.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 690aa MW: 75470.8 Da PI: 5.5566

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	510	555	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L PHT58286.1 510 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 555 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MTDYSLPTMN LWNNSTTDDN VSMMEAFMSS DLSFWGGTTT SSATATAAAL ANPNYTSTVY 60 PPPGASCASS VTATAAAVTV DASKTMPFFN QETLQQRLQT LIDGARETWT YAIFWQSSDL 120 DFSSPSVLGW GDGYYKGEED KNKRKLSVSS PAYIAEQEHR KKVLRELNSL ISGTQTGTDD 180 AVDEEVTDTE WFFLISMTQS FVNGNGLPGQ AMCSSSPIWV AGVEKLAASH CERARQAQGF 240 GLQTMVCIPS ANGVVELGST ELIIQSSDLM NKVRVLFNFN NDLGPGSWAV QPESDPSALW 300 LTEPSSSGME VRESLNTVQT SSIPSSNSNK QIAYGNENND HPSGNGNGHS SYNQQHPHQQ 360 TQGFFTKELN FSDFGFDGSS NRNGNSSLSC KPESGEILNF GDSTKKSACS ANGNLFSGHS 420 QFGAGEENKN KTKKRSATSR GSNEEGMLSF VSGTVLPSSG MKSGGGEDSD HSDLEASVVK 480 EADSSRVVEP EKKPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNVSKMD 540 KASLLGDAIS YINELKSKLH NTESDKEDLK SQIEDLKKEL ASKESRRPGQ PSPNQDLKMS 600 SHIGTKIVDA EIDIKIMGWD VMIRVQCNKK NHPAARFMAA LMELDLDVNH ASVSLVNELM 660 IQQATVKMSS RHYTEEQLRI ALMSRIAETR

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MTDYSLPTMN LWNNSTTDDN VSMMEAFMSS DLSFWGGTTT SSATATAAAL ANPNYTSTVY  60
PPPGASCASS VTATAAAVTV DASKTMPFFN QETLQQRLQT LIDGARETWT YAIFWQSSDL  120
DFSSPSVLGW GDGYYKGEED KNKRKLSVSS PAYIAEQEHR KKVLRELNSL ISGTQTGTDD  180
AVDEEVTDTE WFFLISMTQS FVNGNGLPGQ AMCSSSPIWV AGVEKLAASH CERARQAQGF  240
GLQTMVCIPS ANGVVELGST ELIIQSSDLM NKVRVLFNFN NDLGPGSWAV QPESDPSALW  300
LTEPSSSGME VRESLNTVQT SSIPSSNSNK QIAYGNENND HPSGNGNGHS SYNQQHPHQQ  360
TQGFFTKELN FSDFGFDGSS NRNGNSSLSC KPESGEILNF GDSTKKSACS ANGNLFSGHS  420
QFGAGEENKN KTKKRSATSR GSNEEGMLSF VSGTVLPSSG MKSGGGEDSD HSDLEASVVK  480
EADSSRVVEP EKKPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNVSKMD  540
KASLLGDAIS YINELKSKLH NTESDKEDLK SQIEDLKKEL ASKESRRPGQ PSPNQDLKMS  600
SHIGTKIVDA EIDIKIMGWD VMIRVQCNKK NHPAARFMAA LMELDLDVNH ASVSLVNELM  660
IQQATVKMSS RHYTEEQLRI ALMSRIAETR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	492	500	KKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein