PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58273.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 261aa    MW: 28846.4 Da    PI: 5.8649
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.0001381103123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C + F++   L  H+++H
  PHT58273.1  81 YTCTFCRREFRSAQALGGHMNVH 103
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAAELGILSS TQLQKLAQSQ EEQNQQQPPP LNTGSASDCW MWNAKQATRA TPQDDDDSWE  60
VRAFEEDTGN AMGTTWPPRS YTCTFCRREF RSAQALGGHM NVHRRDRARL HQTPPQYASN  120
SNYHNHTSSP NANSTLLIPT QEFVANGGLC LLYSLPNPSN THVFNPTSRK SSTLNNNSSP  180
STLNLSISPY PTSNLMSPST PCPLSFPINR PNPSINTSSN TSNDDNNHDY GINTRDSTIE  240
DELDLELRLG WRSSSSTTSS P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.16e-37C2H2 family protein