PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58073.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 279aa MW: 31699.4 Da PI: 4.8781

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	1e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd +l++ + G +W+++++ g++R++k+c++rw +yl PHT58073.1 14 KGPWTTEEDTKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.1	1.3e-15	71	111	5	47
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++ +d++++lG++ W++Ia++++ gRt++++k++w+++ PHT58073.1 71 SDAEEKMVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 778*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGRQPCCDKL GVKKGPWTTE EDTKLINFIL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL SDAEEKMVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLKMG 120 IDPVTHEPLI KEENPTDQPI QESDQNKNND HQQVVVVTAG ATSSELDNSS TSSSSASSSE 180 NSCNESKLVL DTFKENDPLL SCLLEADDAP PLIDSSWELP VKSFDNNNNN NMTSSWDDES 240 FNWLFDCQDF GIHDFGFDNC FNDVELEVFN TIYDMENKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	2e-90	MYB family protein