PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57923.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 297aa MW: 33901.2 Da PI: 6.5113

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	8.7e-08	246	279	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + PHT57923.1 246 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 279 469*****************************87 PP
2	ELK	26.3	1.7e-09	200	221	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ PHT57923.1 200 ELKIELKQGFRSRIEDVREEIL 221 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MQEQGVGIMG STSHHHDISS MMISDDINHS TQLKGEIATH PLYEQLLSAH VACLRVATPI 60 DQLPLIDAQL SQSGSLLRSY VSSQQHQHQQ LSPHERQELD NFLAQYLLVL CSFKEQLQQH 120 VRVHAVEAVM ACREIEQNLQ VLTGATLGEG TGATMSDDED ELQMDFSLDQ SGGDAHDLMG 180 MGFGLPTESE RSLMERVRQE LKIELKQGFR SRIEDVREEI LRKRRAGKLP GDTTTVLKNW 240 WQQHSKWPYP TEDDKAKLVE ETGLQLKQIN NWFINQRKRN WHSNSQSVTS LKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	297	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-152	TALE family protein