PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57887.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 372aa    MW: 42471 Da    PI: 6.2368
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.47.9e-30149209259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDg++WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++dp ++eitY+g+H+++
  PHT57887.1 149 DDGFSWRKYGQKDILGAKYPRSYYRCTYRlmqNCWATKQVQRSDDDPALFEITYKGSHTCN 209
                 8***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MDCGFNWEYN SLINELTQGL EHAKQLRASF SYDKIQELDF HLQMIFSSFE KSLSILKWND  60
TVTQSPLLIA PLVSTGAPES SISVDDNNNN NVSSEIPHVG YGEGTVYADV TPKIDDQDFK  120
YVSKKRKQMP TWSEQVRVNA ENGYERPTDD GFSWRKYGQK DILGAKYPRS YYRCTYRLMQ  180
NCWATKQVQR SDDDPALFEI TYKGSHTCNQ TFHSATQLKS PEKHKLKKQA NNPRTIQSNQ  240
MLANFQANLR VNINDLDKKE ATSSFQFSPT FSGFVGENLH FQRSQDDDNL VGGYSLSFVS  300
PTTPESSYFS LPSSHMNGSR RIHNVHHSES DLPDLFSANT SSTSSPIIGL EFPLERVELD  360
PNFPFHNSEF FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-55WRKY family protein