PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT57768.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRF | ||||||||
Protein Properties | Length: 434aa MW: 47165 Da PI: 6.9676 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 74.4 | 1.2e-23 | 148 | 191 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rC+RtDGKkWRCsr+v +++k+CErH h+++ rsrk++e PHT57768.1 148 DPEPWRCKRTDGKKWRCSRDVAPDQKYCERHAHKSKPRSRKHVE 191 79****************************************97 PP | |||||||
2 | QLQ | 36.4 | 1.6e-13 | 89 | 124 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Qlq++ +Q + Ky++a++PvPp+Ll+++++ PHT57768.1 89 PFTASQLQEFQRQSIICKYIMASMPVPPQLLLPLPN 124 9********************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence |
MGNGENSELL DLKMKTSTES SYPYKSSLFI SPSSHSGDDG GSGCGGPGDF VGSDIYDVVS 60 SDAALSSRPL QQPFNYTARG SMGLFGKVPF TASQLQEFQR QSIICKYIMA SMPVPPQLLL 120 PLPNHPSPAH LPQSNTSGLD LKFSSGSDPE PWRCKRTDGK KWRCSRDVAP DQKYCERHAH 180 KSKPRSRKHV EIHNSNSNRH PPAPKSNSKH HSLQFPSDQT RCIEWLGRGD RSGTIPVVTS 240 NQQNLQQLMQ SSSGVGFNND NTDQNRRITP AFQVQDEAKV YPLNFNQYMS NTGQALGSQL 300 KNEQCNDSVI SSFQGRGTTR DLIDACSKDG LSDGISNNGS FTSLTLSMSG WNRGMDDDNE 360 HAQVTIGDEV LRSQWLNPVS WMSSTAPGGP LGEALCLGNA TNLPSPHGYS NSTVTSSCSF 420 GSCENGSHGF DFIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24150.1 | 4e-31 | GRF family protein |