PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57715.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 472aa MW: 53059.1 Da PI: 7.0316

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.5	2.4e-13	285	328	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ErrRR++iN++f L ++lP++ K++K++ L +++eY+k+L+ PHT57715.1 285 ISERRRREKINERFMHLASMLPTS-----SKVDKVSLLDETIEYMKELE 328 67*******************8.....7**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MVLFNSSLPH QSASIQTVIC FPYLGGVIEL GVTELVLEDP NLIQQIKNSF LEADQSVISK 60 RPNYVSNDRN IVSQKLFYNI LENDAYPVEI NNSSPHDSSN GFVANQEAED SLMVVDVIGE 120 TTQAQSWKFM DDNMSNGAND SLNSSDCISQ NNANCEKLSP LSSGEKETKP CPLDRQEHNQ 180 KKLHPSDHQG DDAQYQAVLS TLLKTSDQLT LGPHFRNSNK KSSFVGWKNN IQMQRVGTAQ 240 KLLKRVLLEV PRMHGGVIHK ISKENRRKNN LLRPEVDDID KNRVISERRR REKINERFMH 300 LASMLPTSSK VDKVSLLDET IEYMKELERR VQDLEARSAR RSNDTAEQTS DNCGTSKFND 360 IKVSLPKKRK ACDMDEIEPE NCNGLLKGSS ADSIVINMID KEVSIKMRCL WSEGLLLKIM 420 EALTNLQMNC HTVQSSNIEG ILSIAIESKS AGSKKVAVGT IREALQRVVW KS

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MVLFNSSLPH QSASIQTVIC FPYLGGVIEL GVTELVLEDP NLIQQIKNSF LEADQSVISK  60
RPNYVSNDRN IVSQKLFYNI LENDAYPVEI NNSSPHDSSN GFVANQEAED SLMVVDVIGE  120
TTQAQSWKFM DDNMSNGAND SLNSSDCISQ NNANCEKLSP LSSGEKETKP CPLDRQEHNQ  180
KKLHPSDHQG DDAQYQAVLS TLLKTSDQLT LGPHFRNSNK KSSFVGWKNN IQMQRVGTAQ  240
KLLKRVLLEV PRMHGGVIHK ISKENRRKNN LLRPEVDDID KNRVISERRR REKINERFMH  300
LASMLPTSSK VDKVSLLDET IEYMKELERR VQDLEARSAR RSNDTAEQTS DNCGTSKFND  360
IKVSLPKKRK ACDMDEIEPE NCNGLLKGSS ADSIVINMID KEVSIKMRCL WSEGLLLKIM  420
EALTNLQMNC HTVQSSNIEG ILSIAIESKS AGSKKVAVGT IREALQRVVW KS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	287	292	ERRRRE
2	288	293	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-103	bHLH family protein